Electron Microscopy Symposium, KBC, Umeå University, September 22, 2016
Date: 2016-09-22
Time: 13:00 - 18:00
Locations: KBC-huset, Lilla hörsalen, KB3A9
Welcome to the EM Symposium at KBC and the new UCEM cryo-EM Core Facility!
Organised by:
The Umeå Core Facility for Electron Microscopy (UCEM)
Department of Chemistry
Umeå Centre for Microbial Research (UCMR) and The Laboratory for Molecular Infection Medicine Sweden (MIMS)
Programme - Thursday 22 September
13:00 Genomic RNA folding mediates assembly of human parechovirus
Sarah Butcher
Department of Biosciences, University of Helsinki, Finland
webpage
13:40 Mechanism of action of Tc toxins
Stefan Raunser
Max Planck Institute of Molecular Physiology
Dortmund, Germany
webpage abstract
14:20 Update from the Umeå cryo-EM facility
14:30 Coffee
14:50 Molecular Machines in Action
Thomas Marlovits
Centre for Structural Systems Biology, Hamburg, Germany
and Institute of Molecular Biotechnology, Austrian Academy of Sciences (IMBA)
webpage
15:30 Structure analysis of huntingtin and linkage to development of Huntington’s disease
Hans Hebert
Dept of Biosciences and Nutrition and School of Technology and Health
Royal Institute of Technology, Stockholm
webpage
16:10 Refreshments, drinks and coffee
16:20 cryo-EM facility tour
Organised by:
The Umeå Core Facility for Electron Microscopy (UCEM)Department of Chemistry, Umeå Centre for Microbial Research (UCMR) and The Laboratory for Molecular Infection Medicine Sweden (MIMS)
Contact name:
Eva-Maria Diehl, Communication officer for KBC
Phone: +46 73 0885731
6 October 13.00-16.30
Lecture hall Betula, Biomedical Building, NUS
Contact: Åke Forsberg, Professor, UCMR, MIMS and Department of Molecular Biologym This email address is being protected from spambots. You need JavaScript enabled to view it.
Programme:
6 October 13.00-16.30
Lecture hall Betula, Biomedical Building, NUS
Contact: Åke Forsberg, Professor, UCMR, MIMS and Department of Molecular Biologym This email address is being protected from spambots. You need JavaScript enabled to view it.
Programme:
Welcome to the Minisymposium 2016 at Umeå Centr for Microbial Research. The symposium is open to all interested people!
13.00-14.30
Chairpersons: Felipe Cava, MIMS/Molecular Biology and Madeleine Ramstedt, UCMR/Chemistry
13.00-13.15
Irfan Ahmad UCMR postdoc, Group Bernt Eric Uhlin, MIMS/UCMR, Molecular Biology
Regulation of bacterial physiology and pathogenesis by c-di-GMP signalling
13.15-13.30
Paulina Wanrooij, Postdoc, Group Andrei Chabes, MIMS/UCMR, Medical Biochemistry and Biophysics
The effect of altered dNTP pools on mitochondrial DNA
13.30-13.45:
Dmitry Ignatov, UCMR postdoc, Group Jörgen Johansson, MIMS/UCMR, Molecular biology
Search for targets of Listeria monocytogenes small RNA Rli38
13.45-14.00:
Emil Johansson, PhD student, Group Mikael Elofsson, UCMR, Chemistry
Design and synthesis of novel sialic acid conjugates that block host cell attachment by sialic acid recognizing viruses
14.00-14.15
Victoriia Murina, Postdoc, Group Vasili Hauriliuk, Gemma Atkinson MIMS/UCMR, Molecular Biology
Antibiotic resistance mediated by ribosome-associated ABCF ATPases
14.15–15.30
Akbar Espaillat, PhD student, Group Felipe Cava, MIMS/UCMR, Molecular Biology
Chemometric Analysis of Bacterial Peptidoglycan Reveals Atypical Modifications That Empower the Cell Wall against Predatory Enzymes and Fly Innate Immunity
15.30-15.00 Coffee break
15.00-16.30
Chairpersons: Magnus Andersson, UCMR/Physics and Andrea Puhar, MIMS/Molecular Biology
15.00-15.15
Zhen Zhang, UCMR Postdoc, Group Sun Nyunt Wai, MIMS/UCMR, Molecular Biology
Bacterial toxin production and its modulation of host cell fate
15.15-15.30
Mikkel Quam, Postdoc, Group Joacim Rocklöf, UCMR/Epidemiology and Public Health
The emergence of dengue in naive areas
15.30-15.45
Saskia Erttmann, Postdoc, Group Nelson Gekara, MIMS/UCMR, Molecular Biology
Role of DNA damage response protein ATM in innate immunity
15.45-16.00
David Cisneros, Postdoc, Group Bernt Eric Uhlin, MIMS/UCMR, Molecular Biology,
Cohesin-mediated chromatin structure regulation in mammalian cells
16.00-16.15
Tim Stangner, Postdoc, Group Magnus Andersson, UCMR, Physics
Determining the Specificity of Monoclonal Antibody HPT-101 to Tau-Peptides with Optical Tweezers
16.15-16.30
Roberto Navais, Postdoctoral fellow, Group Maria Fällman, MIMS/UCMR, Molecular biology
Seeking genes involved in transcriptional reprogramming of Yersinia for persistence
Welcome to the UCMR Mini-symposium "Structural dynamics of biological membranes"!
27 October 14:00-16:00
Lilla hörsalen, KB3A9 (new nr. KB.E3.01)
Organisers: Madeleine Ramstedt and Thereza Soares, UCMR and Department of Chemistry
Speakers: Thereza Soares, Michelle Cascella, Jens Preben Morth
UCMR Mini-symposium
Programme
14:00 – 14:30
"Atomistic Simulations of Bacterial Outer Membrane Models"
Thereza Soares
professor, currently guest professor at UCMR and Department of Chemistry
Department of Fundamental Chemistry, University of Pernambuco, Brazil
14:30 – 15:00
"Multi-scale Modelling of Biological Systems Using Coarse-Grained and Hybrid Particle-Field Approaches"
Michele Cascella
professor, Department of Chemistry, University of Oslo, Norway
15:00 – 15:30
Coffee break
15:30 – 16:00
"The magnesium transporter A, is dependent on cardiolipin and selectively sensitive to free magnesium"
Jens Preben Morth
Associate Professor, Centre for Molecular Medicine Norway (NCMM), University of Oslo, Norway
Welcome to the annual KBC conference! Update yourself and meet your colleagues!
The programme includes:
Contact: Eva-Maria Diehl, Anne Honsel, This email address is being protected from spambots. You need JavaScript enabled to view it.
Deadline for registration: 1 November 2016
Programme and registration information:
Laureate Lecture
Edvard Moser
Nobel Laureate 2014
Kavli Institute for Systems Neuroscience
Centre for Neural Computation
Faculty of Medicine
Norwegian University of Science and Technology
Title:
Grid cells and the brain’s map of space
Place: Aula Nordica
Thesis Defence
Ummehan Avican
MIMS research group Åke Forsberg
Department of Molecular Biology
Title:
Twin Arginine Translocation in Yersinia, the Substrates and the Role in Virulence.
Faculty Examiner: Docent Åsa Sjöling, Department of Microbiology, Tumor and Cell Biology, Karolinska Institute
Supervisor: Åke Forsberg
Place: Major Groove, Department of Molecular Biology, NUS, Building 6L
Welcome to the UCMR DAY 12 January 2017!
All scientists and staff members within UCMR (Umeå Centre for Microbial Research) research groups, collaboration partners and researchers with an interest in microbial research and/or infection biology are invited to a day of inspiring research presentations and an excellent opportunity for networking and initiation of multidisciplinary collaborations.
Find more information about the programme and registration on the webpage of UCMR:
Place: Minor and Major Groove, Department of Molecular Biology, NUS, Building 6L
Contact: Åke Forsberg, This email address is being protected from spambots. You need JavaScript enabled to view it.
Department of Clinical Microbiology
Thesis defence
Arunkumar Upadhyay
Department of Clinical Microbiology, Virology, and MIMS
Title:
Characterizing viperin mode of action through its interaction host factors
Faculty Examiner: Michael Beard, Hepatitis C research Laboratory, School of molecular and Biomedical Science, University of Adelaide, Adelaide, Australien.
Supervisor: Anna Överby, Clinical Microbiology and MIMS group leader
Place: Lecture Room E04, målpunkt R, Biomedicinhuset 6 A-L, NUS
Department of Molecular Biology
Thesis Defence
Sofie Ekestubbe
Title:
Effects of LcrV and YopN on translocation regulation in the T3SS.
Faculty Examiner: Kurt Schesser, PhD, Department of Microbiology and Immunology, University of Miami.
Supervisor: Åke Forsberg
Place: Naturvetarhuset N200
Mini-symposium organised by Wallenberg Centre for Molecular Medicine.
Talks by invited candidates for the tenure track positions:
Nicholas Taylor
Biozentrum, Basel University, Switzerland
Revealing the triggering mechanism of the bacteriophage T4 nanosyringe by near-atomic resolution cryo-electron microscopy
Eija Pirinen
Research Program for Molecular Neurology, University of Helsinki, Finland
The role of NAD+-dependent enzymes, sirtuins and poly(ADP-ribose) polymerases, in the regulation of mitochondrial function
Changchun Chen
MRC Laboratory of Molecular Biology, University of Cambridge, UK
Interleukin-17 acts like a neuromodulator of sensory responses
Ronnie Berntsson
Dept of Medical Biochemistry and Biophysics, Umeå University, Sweden
From membrane transporters and bacterial neurotoxins to conjugation via T4SS
Gisa Gerold
TWINCORE, Institute for Experimental Virology, Hannover, Germany
Virology meets proteomics: Virus entry factor discovery and beyond
Marc Erhardt
Helmholz-Zentrum für Infektionsforschung GmbH, Braunschweig, Germany
Molecular mechanisms of bacterial motility during Salmonella pathogenesis
Juha Saarikangas
Institute of Biochemistry, ETH Zürich, Switzerland
How aging generates cellular diversity through asymmetrically inherited protein assemblies
Edwin Oh
Duke University Medical School, Duke University, Durham, USA
Modeling a role for cilia in development and disease
Place: NUS 27, Kvinna-barn-onkologi-huset, Bergasalen, NUS , Södra entren
Welcome to the minisymposium "Infectious Disease Epidemiology and Ecology"
Where: Room E04 (next to “Blodcentralen”), building 6M
When: 14th February, 13.00-17.00
13.00 Welcome
INFECTIOUS DISEASE EPIDEMIOLOGY
13.01-13.15: Rift Valley Fever Epidemiology - Magnus Evander
13.15-13.30: Herpes and Alzheimer – Insights and Hypotheses - Hugo Lövheim
13.30-13.45: Sindbis – An Upcomer? - Åsa Gylfe
13.45-14.00: The Spanish Flu - Urban Kumlin
14.00-14.15: A Reverse Ecology Approach to Understand Tularemia Outbreaks - Anders Johansson
14.15-14.30: Influenza & Social Networks - Martin Rosvall
DOCTORAL STUDENT/POSTDOC PITCH SESSION
14.30-15.30: Doctoral Students/Postdocs (2-4 min per presenter)1
Coffee/tea will be available
INFECTIOUS DISEASE ECOLOGY
15.30-15.45: Ecology of the Puumala virus - Frauke Ecke
15.45-16.00: Modelling Invasion and Abundance of Dengue and Zika Vectors - Jing Helmersson
16.00-16.15: Evolution of Infectious Diseases in Seasonal Environments - Åke Brännström
16.15-16.30: Water-borne Disease and Water Treatment - Andreas Tornevi
16.30-16.45: Early Warning Systems for Infectious Outbreaks - Joacim Rocklöv
16.45-17.00 Summing up and informal discussion
1Roberta Kwok. Communication: Two minutes to impress. Nature, 494, 137-138 (2013). doi:10.1038/nj7435-137a
Questions to: This email address is being protected from spambots. You need JavaScript enabled to view it.or This email address is being protected from spambots. You need JavaScript enabled to view it.
The Novozymes Prize 2017 was awarded to Emmanuelle Charpentier together with Virginijus Siksnys.
In connection with the Prize, Emmanuelle Charpentier will give a celebratory lecture at MIMS, on 27 March.
NOVOZYMES PRIZE institutional lecture
NOTE! The lecture starts at 14:30 not at 15:00 as announced earlier!
Programme
Welcome
Bernt Eric Uhlin, Professor, Director of MIMS, UCMR
Dieter Müller, Professor, Deputy Vice-Chancellor of Research, Umeå University
Introduction to the Novo Nordisk Foundation
Niels-Hendrik von Holstein-Rathlou, Professor, CSO Novo Nordisk Foundation
Motivation for awarding the Novozymes Prize
Søren Molin, Professor, Chair, Novozymes Prize Committee
Lecture:
"The CRISPR-Cas9 game changer in genome engineering: lessons learned from bacteria"
Speaker:
Emmanuelle Charpentier
Professor, Max Planck Institute for Infection Biology, Berlin, Germany
Visiting Professor and Group Leader at MIMS and Umeå Centre for Microbial Research (UCMR), Department of Molecular Biology, Umeå University After the lecture the Novo Nordisk Foundation will host a reception in front of Major Groove
Place: Major Groove, building 6 L, Biomedicine building, Department of Molecular Biology
Contact: Eva-Maria Diehl, This email address is being protected from spambots. You need JavaScript enabled to view it.
Major technical advances has enabled cryo-EM to become a mainstream technique in visualization of macromolecules, which provides the most definitive way to describe their mechanisms of action. The first international cryo-EM symposium in Sweden will take place in Stockholm and Umeå, and present the developments that are shaping this scientific breakthrough. Topics covered include central discoveries in cryo-EM, the most recent methodological developments and applications to central biological questions.
Note: the 1st day of the Symposium takes place on 8th of May 2017 at SciLifeLab, Stockholm.
Everybody is welcome!
Registration form to the Umeå Symposium 9th May 2017
Venue: Stora hörsalen, KBC-building, Umeå University
Map
Registration form
8.45 | Welcome Hans Adolfsson, Vice-Chancellor, Umeå University |
9:00 – 9:45 | Reducing the cost and increasing the speed of cryoEM Richard Henderson MRC Laboratory of Molecular Biology, Cambridge, UK webpage |
9:45 – 10:30 | Structures of scarce native complexes by cryo-EM: Finally following eukaryotic ribosome biogenesis at molecular resolution Roland Beckmann Gene Center, University of Munich LMU, Germany webpage |
10:30 – 11:00 | Coffee and posters |
11:00 – 11:45 | Single particle analysis of chromatin complexes Sara Sandin Nanyang Technological University, NTU, Singapore webpage |
11:45 – 12:30 | Protein synthesis in organelles at cryo-EM resolution Alexey Amunts Stockholm University website |
12:30 – 14:00 | Lunch and posters |
14:00 – 14:45 | Opening windows into the cell: Revealing the molecular architecture of the nuclear periphery Elizabeth Villa University of California, San Diego, USA website |
14:45 – 15:30 | A Hitchhiker's guide to cryo-tomography: travel tips on things to do Elisabeth Fischer National Institute of Allergy and Infectious Diseases, NIH Bethesda, MD, USA website |
15:30 – 16:00 | Coffee and posters |
16:00 – 16:45 | Using new methods in cryo-EM to gain mechanistic insight into gene expression Lori Passmore MRC Laboratory of Molecular Biology, Cambridge, UK website |
16:45 – 17:30 | Enabling and doing structural biology in situ - Recent advances in cryo-electron tomography Jürgen Plitzko Max Planck Institute of Biochemistry, Martinsried/Munich, Germany website |
17:30 | Closing remarks Bernt Eric Uhlin Director Cryo-EM Facility Umeå Scientific Coordinator of UCMR and Director of MIMS, Umeå University website |
18:00 | Dinner |
Friday 9 June 9:30-11:20
Lilla Hörsalen, KB.E3.01UCMR / MIMS Mini-Symposium
Chairpersons: Maria Fällman (MIMS) and Elisabeth Sauer-Eriksson (UCMR)
09.30-9.50
Lars Anders Carlson
WCMM Fellow, Medical Chemistry and Biophysics, UmU
HIV-1 assembly studied by cryo-electron tomography and in vitro reconstitution
09.50-10.20
Richard Lundmark
MIMS Group Leader,Integrative Medical Biology, UmU
A correlative approach to understand membrane sculpting
10.20–10.40 Coffee
10.40-11.00
Andrea Puhar
MIMS Group Leader, Molecular Biology, UmU
Regulation of inflammation during infection in the gut
11.00–11.20
Felipe Cava
MIMS Group Leader, Molecular Biology, UmU
The mureinome: defining the fundamental principles that govern bacterial cell wall homeostasis towards the development of new species-specific antimicrobial therapies
Jubilee symposium to celebrate Knut and Alice Wallenberg Foundation's 100 years anniversary
To celebrate 100 years in support of excellent Swedish research and education, the Knut and Alice Wallenberg Foundation arranges, in collaboration with the Royal Swedish Academy of Sciences and the Swedish universities, a series of symposia in areas where the Foundation has provided substantial financial support throughout the years.
The six symposia have different focus and are organised in Lund (4 April), Linköping (13 September), Stockholm (15 September), Uppsala (21 September), and Gothenburg (28 September).
The symposium in Umeå "Infection Research to Meet current and Future Challenges" will take place on:
19 June 2017, 08.45 - 17.20
Aula Nordica, Umeå (->map)
Read more on the website of the Royal Swedish Academy of Sciences
Welcome to the MIMS Mini-Symposium
Place: Major Groove, Department of Molecular Biology, Umeå University, Building 6K/L, Campus of the University Hospital
12.10
Systematic functional characterisation of malaria parasite-host interactions
Ellen Bushell
Wellcome Trust Sanger Institute
Wellcome Genome Campus, Hinxton, Cambridge, UK
12.40
Pathogenic potential in the healthy microbiome
Falk Hildebrand
European Molecular Biology laboratories, Heidelberg, GERMANY
13.10
MRSA epidemic: from DNA replication to enhanced therapies
Ignacio Mir Sanchis
Department of Biochemistry and Molecular Biology
The University of Chicago, USA.
13.40 Coffee
14.00
The hidden power of cell-autonomous immunity – a molecular genetic approach in Chlamydia trachomatis
Barbara Sixt
INSERM U1138, Institut Gustave Roussy, Villejuif, FRANCE
14.30
Neoteric strategies of mitochondrial modulation by pathogenic sncRNAs
Bhupesh Prusty
Department of Microbiology, Julius-Maximilians, University of Würzburg
Biozentrum, Würzburg, GERMANY
15.00 End of Symposium
Hosts: Bernt Eric Uhlin, Maria Fällman, Åke Forsberg
Celebrating the Nobel Prize in Chemistry 2017
Arrhenius Laboratory, Stockholm University, December 9, 2017
Visualizing the structures of biological molecular machines is an absolute requirement in order to understand their mechanism. Cryo-EM is a key method for this visualization, and due to the recent technical developments it can provide refined atomic structures even for structure-based drug design. The symposium coincides with the Nobel Prize that has been awarded for the development of the cryo- EM and will present the methodological progress as well as the applications to central biological questions. It brings together world-leading experts, Swedish researchers, and industrial scientists to discuss ideas for further advancement in this exciting and rapidly evolving field.
The symposium is free of charge but requires registration via symposium website: http://www.mmk.su.se/cryo-em-symsposium. All researchers are welcome to take active part and contribute with posters. Deadline for registration: November 20, 2017.
The Nobel Lectures given by this year’s Nobel Laureates in Physics and Chemistry will be held 9.00-14.00, December 8, Aula Magna, Stockholm University, which are open to public. The Nobel Prize Award Ceremony will be held on December 10.
09.00 – 09.10
Welcome and introduction – Sven Hovmöller, Stockholm University
09.10 – 09.45
Nigel Unwin, MRC Laboratory of Molecular Biology, UK The structural basis of fast synaptic transmission explored by cryo-EM
09.45 – 10.20
Marin van Heel, Leiden University and LNNano, Campinas Brazil TBA
10.20 – 10.40
Shintaro Aibara, SciLifeLab/Stockholm University, Sweden From pharmaceutical compounds to ribosomes
10.40 – 11:00 Coffee break
11.00 – 11.35
Chris Russo, MRC Laboratory of Molecular Biology, UK Determining and avoiding some of the physical limits in electron cryomicroscopy
11.35 – 12.10
Christian Spahn, Charité-Universitätsmedizin, Germany The ribosome - a paradigm for a macromolecular machine
12.10 – 12.30
Bjorn Forsberg, SciLifeLab/Stockholm University, Sweden Current and future processing paradigms in cryo-EM
12.30 – 14.00 Lunch and poster session, Arrhenius Laboratory
14.00 – 14.35
Yoshinori Fujiyoshi, Nagoya University, Japan Structure-Guided Drug Development by CryoEM
14.35 – 15.10
Peijun Zhang, University of Oxford and eBIC, Diamond Light Source, UK Structural Basis of HIV Capsid Assembly, Maturation and Host Cell Interactions
15:10 – 15:30
Janna Bigalke, AstraZeneca Pharmaceuticals, Möndal, Sweden The secret to cell regeneration: structural basis for RET activation by Neurturin
15.30 – 15.50 Coffee break
15:50 – 16:15
Hongwei Wang, Tsinghua University, China New opportunities that the phase plate brings to Cryo-EM
16:15 – 16:40
Dan Shi, Howard Hughes Medical Institute, USA< MicroED – a new application of electron crystallography in structural biology
16:40 – 17:00
Hongyi Xu, Stockholm University, Sweden Electron crystallography for studying protein structures
17.00– 17:15 Concluding remarks
Organisers:
Alexey Amunts (SciLifeLab/SU)
Erik Lindahl (SciLifeLab/SU & KTH)
Hans Hebert (KTH & KI)
Sven Hovmöller, Hongyi Xu, Xiaodong Zou (SU)
Contact: This email address is being protected from spambots. You need JavaScript enabled to view it.
Welcome to an open lecture of
Jacques Dubochet
Nobel laureate in Chemistry 2017
Title:
The science that gave me a Nobel prize and the science that didn’t
Place: Aula Nordica, Universum
Jacques Dubochet, who is based at the University of Lausanne in Switzerland, will be awarded the Nobel prize on December 10 together with Joachim Frank and Richard Henderson, for developing cryo-electron microscopy for the high-resolution structure determination of biomolecules in solution.
Umeå University and the Umeå Core Facility for Electron Microscopy (UCEM) has one of two cryo-electron microscopes in Sweden.
Hosts for the visit are Linda Sandblad, Director of UCEM and researcher at UCMR, MIMS and the Department of Microbiology, and Lars-Anders Carlson, researcher at WCMM and the Department of Medical Biochemistry and Biophysics.
During his visit, Professor Dubochet will also meet Umeå-based researchers and school students.
More information about the 2017 chemistry prize is available at the Nobel committé website
Welcome to the UCMR DAY 11January 2018!
All scientists and staff members within UCMR (Umeå Centre for Microbial Research) research groups, collaboration partners and researchers with an interest in microbial research and/or infection biology are invited to a day of inspiring research presentations and an excellent opportunity for networking and initiation of multidisciplinary collaborations.
This year, we will organise roundtable discussions to enhance interaction between the more than 50 research groups which are connected within the UCMR
Find more information about the programme and registration will be published on the webpage of UCMR:
Place: Minor and Major Groove, Department of Molecular Biology, NUS, Building 6L
Contact: Åke Forsberg, This email address is being protected from spambots. You need JavaScript enabled to view it.
Welcome to the 1st Arctic Meeting on Clinical Tuberculosis, 25-26 January
Place: Norrland University Hospital, Umeå University