Publications 2006

Aberg, A., Shingler, V., and Balsalobre, C. (2006). (p)ppGpp regulates type 1 fimbriation of Escherichia coli by modulating the expression of the site-specific recombinase FimB. Mol Microbiol 60, 1520-1533.

Aili, M., Isaksson, E., Hallberg, B., Wolf-Watz, H., and Rosqvist, R. (2006). Functional analysis of the YopE GTPase-activating protein (GAP) activity of Yersinia pseudotuberculosis. Cell Microbiol 8, 1020-1033.

Andersson, H., Hartmanová, B., Bäck, E., Eliasson, H., Landfors, M., Näslund, L., Rydén, P., and Sjöstedt, A. (2006). Transcriptional profiling of the peripheral blood response during tularemia. Genes Immun 7, 503-513.

Andersson, H., Hartmanová, B., Rydén, P., Noppa, L., Näslund, L., and Sjöstedt, A. (2006). A microarray analysis of the murine macrophage response to infection with Francisella tularensis LVS. J Med Microbiol 55, 1023-1033.

Andersson, M., Fällman, E., Uhlin, B., and Axner, O. (2006). Dynamic force spectroscopy of E. coli P pili. Biophys J 91, 2717-2725.

Andersson, M., Fällman, E., Uhlin, B., and Axner, O. (2006). A sticky chain model of the elongation and unfolding of Escherichia coli P pili under stress. Biophys J 90, 1521-1534.

Aspholm, M., Kalia, A., Ruhl, S., Schedin, S., Arnqvist, A., Lindén, S., Sjöström, R., Gerhard, M., Semino-Mora, C., Dubois, A., et al. (2006). Helicobacter pylori adhesion to carbohydrates. Methods Enzymol 417, 293-339.

Aspholm, M., Olfat, F., Nordén, J., Sondén, B., Lundberg, C., Sjöström, R., Altraja, S., Odenbreit, S., Haas, R., Wadström, T., et al. (2006). SabA is the H. pylori hemagglutinin and is polymorphic in binding to sialylated glycans. PLoS Pathog 2, e110.

Axner, O., Schmidt, F., Foltynowicz, A., Gustafsson, J., Omenetto, N., and Winefordner, J. (2006). Absorption spectrometry by narrowband light in optically saturated and optically pumped collision and Doppler broadened gaseous media under arbitrary optical thickness conditions. Appl Spectrosc 60, 1217-1240.

Balsalobre, C., Johansson, J., and Uhlin, B. (2006). Cyclic AMP-dependent osmoregulation of crp gene expression in Escherichia coli. J Bacteriol 188, 5935-5944.

Balsalobre, C., Silván, J., Berglund, S., Mizunoe, Y., Uhlin, B., and Wai, S. (2006). Release of the type I secreted alpha-haemolysin via outer membrane vesicles from Escherichia coli. Mol Microbiol 59, 99-112.

Berglin, E., Johansson, T., Sundin, U., Jidell, E., Wadell, G., Hallmans, G., and Rantapää-Dahlqvist, S. (2006). Radiological outcome in rheumatoid arthritis is predicted by presence of antibodies against cyclic citrullinated peptide before and at disease onset, and by IgA-RF at disease onset. Ann Rheum Dis 65, 453-458.

Bernardo, L., Johansson, L., Solera, D., Skärfstad, E., and Shingler, V. (2006). The guanosine tetraphosphate (ppGpp) alarmone, DksA and promoter affinity for RNA polymerase in regulation of sigma-dependent transcription. Mol Microbiol 60, 749-764.

Bröms, J., Edqvist, P., Forsberg, A., and Francis, M. (2006). Tetratricopeptide repeats are essential for PcrH chaperone function in Pseudomonas aeruginosa type III secretion. FEMS Microbiol Lett 256, 57-66.

Buchholtz, C., Nielsen, K., Milton, D., Larsen, J., and Gram, L. (2006). Profiling of acylated homoserine lactones of Vibrio anguillarum in vitro and in vivo: Influence of growth conditions and serotype. Syst Appl Microbiol 29, 433-445.

Comstedt, P., Bergström, S., Olsen, B., Garpmo, U., Marjavaara, L., Mejlon, H., Barbour, A., and Bunikis, J. (2006). Migratory passerine birds as reservoirs of Lyme borreliosis in Europe. Emerg Infect Dis 12, 1087-1095.

del Peso-Santos, T., Bartolomé-Martín, D., Fernández, C., Alonso, S., García, J., Díaz, E., Shingler, V., and Perera, J. (2006). Coregulation by phenylacetyl-coenzyme A-responsive PaaX integrates control of the upper and lower pathways for catabolism of styrene by Pseudomonas sp. strain Y2. J Bacteriol 188, 4812-4821.

Drobni, M., Olsson, I., Eriksson, C., Almqvist, F., and Strömberg, N. (2006). Multivariate design and evaluation of a set of RGRPQ-derived innate immunity peptides. J Biol Chem 281, 15164-15171.

Edqvist, P., Bröms, J., Betts, H., Forsberg, A., Pallen, M., and Francis, M. (2006). Tetratricopeptide repeats in the type III secretion chaperone, LcrH: their role in substrate binding and secretion. Mol Microbiol 59, 31-44.

Galán, J., and Wolf-Watz, H. (2006). Protein delivery into eukaryotic cells by type III secretion machines. Nature 444, 567-573.

Gustafsson, D., Segerman, A., Lindman, K., Mei, Y., and Wadell, G. (2006). The Arg279Gln [corrected] substitution in the adenovirus type 11p (Ad11p) fiber knob abolishes EDTA-resistant binding to A549 and CHO-CD46 cells, converting the phenotype to that of Ad7p. J Virol 80, 1897-1905.

Holmfeldt, P., Brännström, K., Stenmark, S., and Gullberg, M. (2006). Aneugenic activity of Op18/stathmin is potentiated by the somatic Q18-->e mutation in leukemic cells. Mol Biol Cell 17, 2921-2930.

Kouokam, J., Wai, S., Fällman, M., Dobrindt, U., Hacker, J., and Uhlin, B. (2006). Active cytotoxic necrotizing factor 1 associated with outer membrane vesicles from uropathogenic Escherichia coli. Infect Immun 74, 2022-2030.

Kouokam JC, W.S. (2006). Outer membrane vesicle-mediated export of a pore-forming cytotoxin from Escherichia coli. . Toxin Reviews 25, 31-46.

Larsson, C., Andersson, M., Guo, B., Nordstrand, A., Hagerstrand, I., Carlsson, S., and Bergstrom, S. (2006). Complications of pregnancy and transplacental transmission of relapsing-fever borreliosis. J Infect Dis 194, 1367-1374.

Larsson, C., Andersson, M., Pelkonen, J., Guo, B., Nordstrand, A., and Bergström, S. (2006). Persistent brain infection and disease reactivation in relapsing fever borreliosis. Microbes Infect 8, 2213-2219.

Lindström, A., Pettersson, F., Almqvist, F., Berglund, A., Kihlberg, J., and Linusson, A. (2006). Hierarchical PLS modeling for predicting the binding of a comprehensive set of structurally diverse protein-ligand complexes. J Chem Inf Model 46, 1154-1167.

Loh, E., Gripenland, J., and Johansson, J. (2006). Control of Listeria monocytogenes virulence by 5'-untranslated RNA. Trends Microbiol 14, 294-298.

Lundberg, E., Bäckström, S., Sauer, U., and Sauer-Eriksson, A. (2006). The transthyretin-related protein: structural investigation of a novel protein family. J Struct Biol 155, 445-457.

Milton, D. (2006). Quorum sensing in vibrios: complexity for diversification. Int J Med Microbiol 296, 61-71.

Muschiol, S., Bailey, L., Gylfe, A., Sundin, C., Hultenby, K., Bergström, S., Elofsson, M., Wolf-Watz, H., Normark, S., and Henriques Normark, B. (2006). A small-molecule inhibitor of type III secretion inhibits different stages of the infectious cycle of Chlamydia trachomatis. Proc Natl Acad Sci U S A 103, 14566-14571.

Müller, C., Dobrindt, U., Nagy, G., Emödy, L., Uhlin, B., and Hacker, J. (2006). Role of histone-like proteins H-NS and StpA in expression of virulence determinants of uropathogenic Escherichia coli. J Bacteriol 188, 5428-5438.

Paul-Satyaseela, M., Karched, M., Bian, Z., Ihalin, R., Borén, T., Arnqvist, A., Chen, C., and Asikainen, S. (2006). Immunoproteomics of Actinobacillus actinomycetemcomitans outer-membrane proteins reveal a highly immunoreactive peptidoglycan-associated lipoprotein. J Med Microbiol 55, 931-942.

Pemberton, N., Jakobsson, L., and Almqvist, F. (2006). Synthesis of multi ring-fused 2-pyridones via an acyl-ketene imine cyclocondensation. Org Lett 8, 935-938.

Pemberton, N., Pinkner, J.S., Edvinsson, S., Hultgren, S.J., and Almqvist, F. (2008). Synthesis and evaluation of dihydroimidazolo and dihydrooxazolo ring-fused 2-pyridones - targeting pilus biogenesis in uropathogenic bacteria. Tetrahedron 64, 9368-9376.

Petersson, C., Forsberg, M., Aspholm, M., Olfat, F., Forslund, T., Borén, T., and Magnusson, K. (2006). Helicobacter pylori SabA adhesin evokes a strong inflammatory response in human neutrophils which is down-regulated by the neutrophil-activating protein. Med Microbiol Immunol 195, 195-206.

Pinkner, J., Remaut, H., Buelens, F., Miller, E., Aberg, V., Pemberton, N., Hedenström, M., Larsson, A., Seed, P., Waksman, G., et al. (2006). Rationally designed small compounds inhibit pilus biogenesis in uropathogenic bacteria. Proc Natl Acad Sci U S A 103, 17897-17902.

Pinne, M., Denker, K., Nilsson, E., Benz, R., and Bergström, S. (2006). The BBA01 protein, a member of paralog family 48 from Borrelia burgdorferi, is potentially interchangeable with the channel-forming protein P13. J Bacteriol 188, 4207-4217.

Rydén, P., Andersson, H., Landfors, M., Näslund, L., Hartmanová, B., Noppa, L., and Sjöstedt, A. (2006). Evaluation of microarray data normalization procedures using spike-in experiments. BMC Bioinformatics 7, 300.

Segerman, A., Lindman, K., Mei, Y., Allard, A., and Wadell, G. (2006). Adenovirus types 11p and 35 attach to and infect primary lymphocytes and monocytes, but hexon expression in T-cells requires prior activation. Virology 349, 96-111.

Tedeschi, R., Bidoli, E., Agren, A., Hallmans, G., Wadell, G., De Paoli, P., and Dillner, J. (2006). Epidemiology of Kaposi's Sarcoma herpesvirus (HHV8) in Västerbotten County, Sweden. J Med Virol 78, 372-378.

Vaitkevicius, K., Lindmark, B., Ou, G., Song, T., Toma, C., Iwanaga, M., Zhu, J., Andersson, A., Hammarström, M., Tuck, S., et al. (2006). A Vibrio cholerae protease needed for killing of Caenorhabditis elegans has a role in protection from natural predator grazing. Proc Natl Acad Sci U S A 103, 9280-9285.

Wiley, D., Nordfeldth, R., Rosenzweig, J., DaFonseca, C., Gustin, R., Wolf-Watz, H., and Schesser, K. (2006). The Ser/Thr kinase activity of the Yersinia protein kinase A (YpkA) is necessary for full virulence in the mouse, mollifying phagocytes, and disrupting the eukaryotic cytoskeleton. Microb Pathog 40, 234-243.

Åkesson, P., Moritz, L., Truedsson, M., Christensson, B., and von Pawel-Rammingen, U. (2006). IdeS, a highly specific immunoglobulin G (IgG)-cleaving enzyme from Streptococcus pyogenes, is inhibited by specific IgG antibodies generated during infection. Infect Immun 74, 497-503.

Yasmin, L., Jansson, A., Panahandeh, T., Palmer, R., Francis, M., and Hallberg, B. (2006). Delineation of exoenzyme S residues that mediate the interaction with 14-3-3 and its biological activity. FEBS J 273, 638-646.

Åberg, V., Sellstedt, M., Hedenström, M., Pinkner, J., Hultgren, S., and Almqvist, F. (2006). Design, synthesis and evaluation of peptidomimetics based on substituted bicyclic 2-pyridones-targeting virulence of uropathogenic E. coli. Bioorg Med Chem 14, 7563-7581.